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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.258.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.298SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.30.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.76SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
B.1.160.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.385SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.384SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.42.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.348SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.428.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.459SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.415.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.243.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.98SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.566SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.480SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.579SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.11 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.435SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.445SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.124SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.384SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAQSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.569SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.524SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.596.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.473SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.595.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.76.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.38.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.38.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.50SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.494SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.167SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.267SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.165SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.554SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.243.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.2.5.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.450SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.130SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used