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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.77SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.504SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.201SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.221SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.410SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.411SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.310SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.185SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.329SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.229SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.342SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.90SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.169SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.53SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.528SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.175SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.6.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.483SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.181SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.113SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.594SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.328SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.145SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.547SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.247SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.4.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.205SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.110SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.434SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.4.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.181SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.6.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XATSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.85SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.65SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used