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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.258.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.243SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
R.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-20316.5South Korea
B.1.1.216SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.471SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.420SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
L.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.518SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.551SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.207SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.604SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.111SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.619SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.36.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.36.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.23.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.316SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.436SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.558SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.518SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.368SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.404SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.306SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.328SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-2575.96South Korea
B.1.533SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KC.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KL.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HC.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.507SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.54SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.196SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.57SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.459SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.117SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.381SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.237SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.382SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.395SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.40SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.153SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used