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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
CR.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.4.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XWSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
JN.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDJSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.36.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDFSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.575.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.620SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDMSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.2.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GE.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.2.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JC.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KE.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.56SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDTSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.617.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.109 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.2.2 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.2.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.8 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.617.1 (Kappa)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.46.5 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.16 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.10.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.5 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used