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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.177.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.41SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CA.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BL.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BS.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.13.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CP.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EQ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JU.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
BA.5.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
BA.5.1.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.75.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.5.2.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.132 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KF.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CS.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.83SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDGSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCSSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.15.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.40SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CR.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KB.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CJ.1.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XANSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used