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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
A.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDK.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.58SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.10.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.59SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BR.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBDSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CN.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.576SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.325SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.521SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.378SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.206SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.77SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.13.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBESWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.1.4.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.10.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EF.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EK.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.23.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.64SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.68SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.65 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used