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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HN.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.24.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.13.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.20.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.19.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GE.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FU.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
DV.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JG.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JR.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.1.2.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.58.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.13.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDCSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.15.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JR.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-8697.18South Korea
JD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JG.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.26.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCPSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.6.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JF.1.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDESWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KE.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used