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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.16.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.52SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.65SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.75SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.18.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GL.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.78SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.45SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.34.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.79SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HP.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FU.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
EG.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EY.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.44SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FU.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
FL.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EF.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.84SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EU.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.97SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FE.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.3.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
XBB.1.5.95SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
ET.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.11.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
GJ.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used