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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HV.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FG.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.413SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.5.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.268SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.409SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.587SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.232SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.60SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CD.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DE.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.333SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.62SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCYSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
JN.1.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
EK.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
HV.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EF.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BU.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CJ.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.6.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used