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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BQ.1.26.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
DS.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BA.5.1.11EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BF.27EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
AY.56 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.39.1.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.91.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.4.14 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.359EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BN.1.5.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BA.2.66EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.1.485EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
CP.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.177.73EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.112.2 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.13EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Q.8 (Alpha)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.122.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.3.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.5.6 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.440EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.25EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.23.2 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.104 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.198EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
EG.1.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
XAFEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BC.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
P.1.17.1 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.2.3.16EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.177.41EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.375EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BL.1.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
B.1.626EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.629EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
GA.9EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
AY.61 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.2.75.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-9785.9South Korea
GC.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BQ.1.1.16EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.1.524EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.5.2.38EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.1.15.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.1.15EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.59 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBREWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
DJ.1.1.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
CH.1.1.21EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
AZ.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.193EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used