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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AE.6EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.230EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.535EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
A.7EWon-ECACACAATCGATGCGCAGTA20502636526346R-20208.4South Korea
A.24EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.564.1EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.345EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.53EWon-ECACACAATCGATGCGCAGTA20502636526346R-463.749South Korea
B.1.1.450EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.334EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.589EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.335EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.169EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.43EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.42EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
AE.4EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.442EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.75EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.51EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.106EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
D.2EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.593EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.438.1EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.290EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.341EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.161EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
AY.69 (Delta)EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.46EWon-ECACACAATCGATGCGCAGTA20502636526346R-13011.1South Korea
B.1.1.139EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.508EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.94EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.463EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.357EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.318EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.557EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.119EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.160EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
D.4EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.447EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.110.2EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.180EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.155EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.92EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.145EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.120EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.77EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
AE.5EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.504EWon-ECACACAATCGATGCGCAGTA20502636526346R-463.749South Korea
AE.1EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.201EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used