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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.16.18NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.2.3.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.2.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.15NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.2.3.6NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EG.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EU.1.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.2.3.7NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.4.11NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.7.14NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.59NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.24.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.17.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.63NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.2.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GW.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.2.7NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.7.14.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.13.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.18NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.16NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.22NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
HL.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.42.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DZ.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DZ.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.7.14.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DY.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.12NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.16.14NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EG.5.1.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.28NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.20.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.110NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.2.86.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GN.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.8.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
HB.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EG.10.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.89NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
HR.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
HP.1.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GW.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-18100Germany
GS.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XCF.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.34NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
HY.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
JC.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.105NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.9.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used