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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBZNCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BR.2.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.79NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.14NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FD.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CM.7NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.25.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.13.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBC.1.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GC.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.40NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.18.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.15NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EG.14NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.14NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.2.3.12NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.23.2.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.21.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EG.5.1.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EG.5.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
HK.28NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.9NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.42NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.4.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
HK.19NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GR.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EG.1.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.16.21NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.568NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
P.1.13 (Gamma)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.372NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.634NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
C.37.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.630NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.360NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.578NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.544NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.448NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.425NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.354NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.503NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.36.31NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.623NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.214.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.588NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.210NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
A.28NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-18735.2Germany
B.1.567NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
C.23NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used