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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.5 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.108 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.32 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.46.3 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.4.6 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.75.2 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
C.37 (Lambda)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
P.1.14 (Gamma)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
P.1.7.1 (Gamma)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
P.1.2 (Gamma)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.112 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
P.1.10 (Gamma)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
A.2.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.102 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.124 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.46.6 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.43.3 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.119.1 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.25.2 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.122.6 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.621.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.39.2 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.125 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.103.1 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.92 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.122.4 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.101 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.1.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.1.14NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.2.57NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.2.49NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BE.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-19212.8Germany
BA.4.8NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-19212.8Germany
BA.2.9.6NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.2.13NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.2.69NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.4.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.17NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CC.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BZ.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CK.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.13NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CM.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.1.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.1.34NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.6NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.2.35NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EG.1.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.8NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XAY.2.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used