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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.9NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBUNCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.351.5 (Beta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FZ.1.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.9.7NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBC.1.6.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.4.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FQ.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
JB.1.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.17NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.3.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FZ.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DV.7.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.6NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.30.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.68NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CD.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.122.3 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.132 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.160.17NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.4.1.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-19212.8Germany
XBB.1.19NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
KF.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CS.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-19212.8Germany
BA.2.83NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BJ.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XDGNCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GA.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
KD.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XCSNCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GA.7.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FL.15.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.2.40NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CR.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
KB.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GK.11NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CJ.1.3.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XANNCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BN.1.4.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DV.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.2.11NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.2.53NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.4.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-19212.8Germany
EU.1.1.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CM.2.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.43NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
HU.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
JB.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.256NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.26NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used