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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
P.1.13 (Gamma)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.372NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.634NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
C.37.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.630NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.360NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.578NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.544NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.448NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.425NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.354NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.22NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.3.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCUNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.27.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KB.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.32NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.1.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.51.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDD.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.526 (Iota)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.2 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.621 (Mu)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.9.2 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.34 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.47 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
P.1.17 (Gamma)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.126 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.48 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.116.1 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.52 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.13 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.35 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.122 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.7 (Alpha)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
P.1 (Gamma)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.120.1 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GE.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.93NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GM.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.13.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GV.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used