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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.289NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.7.1.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDHNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.6.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FK.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HF.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.31NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HG.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.4.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.9.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDBNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GA.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.35NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GM.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.44NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FU.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FV.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-4273.88South Korea
XBB.1.22.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FE.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBL.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.56NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.1.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.49NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBL.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FR.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCMNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HN.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.42.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HN.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.7.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.20.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.5.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.13.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JY.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCRNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.86NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.1.2.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GE.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HN.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.29NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used