Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.5.66NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.1.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.258.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.1.21.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.37NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.39NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EE.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
ES.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.41NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.19.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.479NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.437NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.371NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.4.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.6.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HU.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.1.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KJ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JC.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.625NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HD.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GY.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.443NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.595.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.495NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.294NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.453NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.44NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.350NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.304NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.315NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.516NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.354NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.162NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.426NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.402NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.424NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.61NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.264NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.581NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.330NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.205NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.177NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.301NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.308NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.210NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.325NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used