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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.2.70NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.63NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.8.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EC.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XLNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BD.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.87 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.23.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XNNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.111 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XGNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.58.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.8.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDD.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDNNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LT.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.8.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LV.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.54.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.30.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.1.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.63NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LE.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LH.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HW.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.55.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.18.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDK.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used