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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.5.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBF.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BZ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-17667.3South Korea
BA.2.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.57NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.52NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.48NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.9.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.6.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.9.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.4.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.58NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAY.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.71NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DN.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CZ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used