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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
C.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Q.2 (Alpha)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
M.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.82 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.23.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.466.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.132 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KF.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
CS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.83NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDGNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KD.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCSNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.15.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
BA.2.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CR.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KB.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CJ.1.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XANNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.4.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.53NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EU.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.256NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.77NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.248NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21305.4South Korea
B.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.70NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used