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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
GW.5.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.23.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JE.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.83NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.24.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.20.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20999.4South Korea
HK.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.19.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GE.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.86.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JG.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-20075South Korea
JR.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.1.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-22305.6South Korea
XDA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.58.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDK.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JQ.2.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.23.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DY.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LE.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MD.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LE.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used