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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BN.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BS.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.75.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.51NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAANWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.50NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.38.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N/ANWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.42.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.348NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.428.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-14910.4South Korea
AJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.459NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.415.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.243.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.98NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.566NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.480NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.579NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.11 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.435NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used