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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.8.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HB.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.10.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.89NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HR.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HP.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GW.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCF.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.34NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HY.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JC.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.105NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.9.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.4.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.103NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HC.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FE.1.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.94NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.15.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.5.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.21NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FW.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JS.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.2.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HG.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GE.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCQNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JC.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.41.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.70NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JG.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JM.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.22.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCFNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.1.1.32NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.109NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FR.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.33NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used