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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HK.25NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.15NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HN.4.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.1.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.13.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.15NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JY.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.7.1.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.7.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JP.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCT.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.15NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GS.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.5.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FE.1.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.20NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.15NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EU.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.59NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.24.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.17.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.63NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GW.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.2.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.14.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.13.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.16NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.22NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HL.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.42.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DZ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used