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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HK.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.3.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDENWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KE.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HF.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.22NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FW.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KH.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
LM.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.17NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.15NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.63.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.27NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.40NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.1.6.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GY.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCWNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GA.2.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.3.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.21NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.36NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.108NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JS.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.104NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HH.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.1.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GA.4.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GW.5.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JE.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.2.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.7.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.23NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GN.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JH.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.1.2.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HN.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.10.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.41.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GW.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JG.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCKNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GN.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.27NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GY.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HH.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used