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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HK.23.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JE.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.83NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.32NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HN.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.24.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.1.8.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GE.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GA.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.3.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.13.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.20.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.8.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.19.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GE.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.6.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FU.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.7.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.86.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.3.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GN.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JG.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JD.1.2.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JD.1.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JR.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.1.2.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.30NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDA.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.1.58.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.33NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JN.13.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XDCNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.15.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JR.1.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JD.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JG.3.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
KE.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HV.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.86.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.26.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XCPNWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.1.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.6.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
JF.1.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used