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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.434NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.4.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.181NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.6.6NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.37NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.22NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.2.21NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.2.22NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.38NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.38.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BT.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.2.55NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.2.76NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.1.30NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BE.11NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.2.9NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.31NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.4.6NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-19212.8Germany
BF.24NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.6.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.1.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.41NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BS.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.1.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.36NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BM.1.1.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.12NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.5.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.18NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.5.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BN.1.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.133NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.18NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.466NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.489NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.363NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.95NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.36.26NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.531NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.45NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.200NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.299NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.55NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.149NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.300NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.179NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
C.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used