Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.585EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.351EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.36.1EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.36.8EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.389EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.549EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.160.7EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
AY.43.2 (Delta)EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.5EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.258.5EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
AY.50 (Delta)EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.266EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.253EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.305EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
AA.6EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.241EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.177.33EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.326EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.255EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.303EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
AA.7EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.173EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.362.2EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.177.48EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.36.9EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.520EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.36.38EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.521EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.383EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.117EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.157EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.187EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.160.30EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.213EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.12EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.341EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.89EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.36.23EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.177.30EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.315EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.204EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.177.50EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.170EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.232EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.177.84EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.76EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.301EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.36.7EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.269EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
B.1.1.234EWon-ECACACAATCGATGCGCAGTA20502636526346R-19261.4South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used