Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
CA.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CP.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
ED.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
BQ.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.56SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDP.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.24.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-2575.96South Korea
GK.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EE.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BW.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KB.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HF.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.42.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.517SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.427 (Epsilon)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.429 (Epsilon)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.166SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.99.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KT.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.334SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.359SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.302SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.222SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.434SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.467SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.110.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.23 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.9 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.74 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used