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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HH.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HU.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GP.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.3.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBVSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.277SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.294SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.81SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HV.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FG.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.413SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.5.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.268SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.409SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.587SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.232SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.60SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CD.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DE.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.333SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.54SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
DR.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.5.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.59SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used