Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BW.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FB.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DN.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CJ.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBF.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.11.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
GJ.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.101SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.4.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FD.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FP.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FD.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FG.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.56SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.59SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.67SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.88SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.48SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used