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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BU.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EW.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BW.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FB.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.3.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-18941.3South Korea
DN.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CJ.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-18941.3South Korea
XBF.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-18941.3South Korea
BQ.1.1.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.31SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GA.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.32SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.65SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.38SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DT.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DS.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.63SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DU.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.53SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.1.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CV.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBKSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.14.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBK.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EF.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CM.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DF.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.35SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EH.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.3.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DF.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CK.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used