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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AM.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.37SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.319SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.182SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.430SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.331SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.112.3 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.37SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
N.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.515SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.287SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.431SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.170SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.506SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.6.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.438.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-20338.9South Korea
B.1.1.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-11836.9South Korea
B.1.188SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.39SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.35SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.422SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.56SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.4.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.198SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.366SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.441SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.416SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.63SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.263SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.135SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FK.1.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DR.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.219SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
N.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.208SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.125.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.78 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.159SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.43.5 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
XBC.1.6.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used