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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
W.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.264.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AT.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.619.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.12.1 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AZ.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.260SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.456SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.160.16SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.4.16 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.70SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.177.42SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.428SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.374SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.63 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.377SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.298SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.30.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.76SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.31SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.385SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.384SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.32SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.133SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.466SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.489SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.363SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.95SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.26SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.531SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.45SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.200SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.299SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.55SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.149SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.300SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.179SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.25SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.125SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
G.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used