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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.43.3 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.119.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.25.2 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
AY.122.6 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.621.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.39.2 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.125 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.103.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.92 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.122.4 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.101 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BA.1.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
BA.2.57SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.49SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.4.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.9.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.69SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DV.6.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.1.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-10601.4South Korea
BN.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.11.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GM.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
BQ.1.1.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.26SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.129 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XAY.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CM.8.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.5.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.1.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.34SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.4.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.15.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.9.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FA.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
ER.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.4.1.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CQ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XMSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used