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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.214.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
B.1.577NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.639NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.2.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AZ.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.270NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.227NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
U.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.236NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.153NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.302NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.194NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.55NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.51NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.308NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.138NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.379NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.240NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.240.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.121.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.1.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KC.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KL.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HC.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-22468.7South Korea
B.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.507NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.196NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.1.57NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.459NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.117NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.381NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.237NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.382NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.395NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.61NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.153NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.62NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.391NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used