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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
R.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.216NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.471NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.420NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
L.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.518NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.551NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.207NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.604NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.111NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.619NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.23.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.316NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.436NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.558NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.518NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.368NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.404NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.306NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.328NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.533NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.120.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.528NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.91 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.617NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.383NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.95 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.189NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-5997.68South Korea
C.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.545NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.482NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JC.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.564NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.461NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used