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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BE.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BW.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
BF.7.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DN.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CJ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBF.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.22.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HW.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GB.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.72NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FE.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDDNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used