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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
GK.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.13.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.5.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.7.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.7.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JP.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCT.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.5.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FE.1.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDD.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KR.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDD.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.64.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDP.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
KR.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KZ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KS.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.4.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDSNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LY.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDQ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
JN.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GJ.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.3.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.5.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.23.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JE.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.83NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.24.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used