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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.2.80NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.134NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BY.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CW.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.42NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAY.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.17.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.562NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.219NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XANWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AZ.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.114NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.199NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.190NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.552NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
B.1.177.89NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
M.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.333NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.429NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.463NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
U.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.373NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.80NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.433NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-19760.5South Korea
AN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.221.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.242NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.449NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.152NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.146NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
D.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.81NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used