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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.2.3.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
EG.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EU.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
FL.4.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.59SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.24.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.17.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.63SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.2.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GW.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.2.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.14.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.13.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.16SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HL.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.42.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DZ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DZ.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.14.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DY.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.14.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.3.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XCUSWon-SCTACATGCACCAGCAACTGT20502311423133F-17417.6South Korea
JN.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.27.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
KB.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JN.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.32SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JN.1.1.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JN.1.51.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XDD.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.526 (Iota)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.2 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.621 (Mu)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.9.2 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.34 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.47 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.17 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.126 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.48 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.116.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.52 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.13 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used