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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
C.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.635SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.19 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AM.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.15 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.113SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.423SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CA.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.46SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CU.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
CA.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.83SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.40SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.2.4 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.161SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
B.1.1.58SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.75SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.411SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.217SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.17 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.41SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.527SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.500SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.147SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.487SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.68SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.121SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AA.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AS.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.115SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.127.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.88SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.168SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.39SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.57SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AH.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.289SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.365SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.252SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.223SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used