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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BQ.1.1.50SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.38.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
N/ASWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.357SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BP.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.46SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.530SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.17.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.2.75.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.570SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.633SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.136SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAYSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAESWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.467SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.484SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.476SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.404SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DJ.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.73SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BR.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.75.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAKSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAASWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.109SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.361SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.38SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.417SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.319SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.182SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.430SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.331SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.112.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used