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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.113 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.43 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.98.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.127 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.83 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.2 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.1.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
AY.3.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.15.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.15.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
AY.36 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.1.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
BA.1.1.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
AY.43.4 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.57 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
AY.3.3 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.28.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.4.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.65SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.39.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDQ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.4.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.7.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.4.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.107SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LF.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.39SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
B.1.1.172SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.110SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.320SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used