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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HF.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FW.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.63.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCWSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.2.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.36SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.108SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JS.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.104SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.4.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JE.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.7.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JH.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.1.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.10.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.41.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCKSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GN.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used