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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
KL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.24.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-2575.96South Korea
GK.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.47SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.58SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.2.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.96SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EZ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.8.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GD.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBZSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BR.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.79SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FD.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.25.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.13.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBC.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.40SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.1.1.11SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.80SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CK.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.37.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.77SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FD.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used