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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EE.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.72SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBJ.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CK.2.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EE.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BW.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KB.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HF.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.42.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.517SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.427 (Epsilon)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.429 (Epsilon)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.166SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.4.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.99.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KT.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.334SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.359SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.302SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.222SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.434SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.467SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.110.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.23 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.9 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.74 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.621.1 (Mu)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.7.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.67SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
CK.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-1215.87South Korea
AY.16.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.9.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.72SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.20SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.73SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDZSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used