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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.23.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.21.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.4.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GR.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.568SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.13 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.372SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.634SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.37.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.630SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.360SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.578SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.544SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.448SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.425SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.354SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.503SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.623SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.214.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.588SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.210SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.567SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.541SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.25SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.189SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.563SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.258SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.426SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.399SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.337SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.539SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.54SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used