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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
N.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.212SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.41.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.4.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JF.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JG.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBBSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
XBB.1.5.62SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.6.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FK.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.4.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.9.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDBSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.44SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FU.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
FV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.22.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FE.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBL.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.56SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.49SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FR.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.18.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used